Experiment List     
Source List     
Treatment Categories     
Search Experiments     
Search Analyzed Data     
Log in as registered user    
What's new?    
NSF Project Home Page    
Help     
Display An Experiment And Allow Editing

Experiment Name:

Oligogalacturonide treatment of seedlings

Experiment Description:

Arabidopsis seedlings were grown in liquid medium for 10 days. At time 0, untreated seedlings were given fresh medium and treated seedlings were given fresh medium containing 200 micrograms/ml oligogalacturonides (OGs). Seedlings were harvested at 1 hour and 6 hours post-treatment. Triplicate samples, each consisting of approximately 15 seedlings, were assayed.

Starting Date (mm/dd/yyyy):

06/07/2004

Researcher:

Simone Ferrari

Genomics/Proteomics Site:

Massachusetts General Hospital

Genomics/Proteomics Investigator:

Fred Ausubel

Experiment Type:

transcriptional profiling
Array Name Array Type Sample Used To Make This Extract Sample Description Source For This Sample (Target) Treatment Used To Make This Extract Treatment Category Treatment Time (Hours) Files Available For Download For This Array
Array 1 Affymetrix SAMPLE 1 (MS 1 h) seedlings in sterile medium Arabidopsis thaliana Sterile medium Sterile medium 1

SF_OGs_073102_1.EXP

SF_OGs_073102_1.CEL

SF_OGs_073102_1.DAT
Array 1d Affymetrix SAMPLE 1 (MS 1 h) seedlings in sterile medium Arabidopsis thaliana Sterile medium Sterile medium 1

SF_OGs_073102_1d.EXP

SF_OGs_073102_1d.DAT

SF_OGs_073102_1d.CEL
Array 2 Affymetrix SAMPLE 2 (MS 1 h) seedlings in sterile medium Arabidopsis thaliana Sterile medium Sterile medium 1

SF_OGs_073102_2.CEL

SF_OGs_073102_2.DAT

SF_OGs_073102_2.EXP
Array 3 Affymetrix SAMPLE 3 (MS 1 h) seedlings in sterile medium Arabidopsis thaliana Sterile medium Sterile medium 1

SF_OGs_073102_3.CEL

SF_OGs_073102_3.DAT

SF_OGs_073102_3.EXP
Array 4 Affymetrix SAMPLE 4 (MS 6 h) seedlings in sterile medium Arabidopsis thaliana Sterile medium Sterile medium 6

SF_OGs_073102_4.DAT

SF_OGs_073102_4.EXP

SF_OGs_073102_4.CEL
Array 4d Affymetrix SAMPLE 4 (MS 6 h) seedlings in sterile medium Arabidopsis thaliana Sterile medium Sterile medium 6

SF_OGs_073102_4d.EXP

SF_OGs_073102_4d.DAT

SF_OGs_073102_4d.CEL
Array 5 Affymetrix SAMPLE 5 (MS 6 h) seedlings in sterile medium Arabidopsis thaliana Sterile medium Sterile medium 6

SF_OGs_073102_5.DAT

SF_OGs_073102_5.CEL

SF_ OGs_073102_5.EXP
Array 6 Affymetrix SAMPLE 6 (MS 6 h) seedlings in sterile medium Arabidopsis thaliana Sterile medium Sterile medium 6

SF_OGs_073102_6.CEL

SF_OGs_073102_6.DAT

SF_OGs_073102_6.EXP
Array 7 Affymetrix SAMPLE 7 (OG 1 h) seedlings treated with oligogalacturonides for 1 hour Arabidopsis thaliana alpha-1,4-oligogalacturonic acid with degree of polymerization 9-18, from citrus pectin OG 1

SF_OGs_073102_7.EXP

SF_OGs_073102_7.DAT

SF_ OGs_073102_7.CEL
Array 7d Affymetrix SAMPLE 7 (OG 1 h) seedlings treated with oligogalacturonides for 1 hour Arabidopsis thaliana alpha-1,4-oligogalacturonic acid with degree of polymerization 9-18, from citrus pectin OG 1

SF_OGs_073102_7d.CEL

SF_OGs_073102_7d.DAT

SF_OGs_073102_7d.EXP
Array 8 Affymetrix SAMPLE 8 (OG 1 h) seedlings treated with oligogalacturonides for 1 hour Arabidopsis thaliana alpha-1,4-oligogalacturonic acid with degree of polymerization 9-18, from citrus pectin OG 1

SF_OGs_073102_8.DAT

SF_OGs_073102_8.CEL

SF_OGs_073102_8.EXP
Array 9 Affymetrix SAMPLE 9 (OG 1 h) seedlings treated with oligogalacturonides for 1 hour Arabidopsis thaliana alpha-1,4-oligogalacturonic acid with degree of polymerization 9-18, from citrus pectin OG 1

SF_OGs_073102_9.EXP

SF_OGs_073102_9.CEL

SF_OGs_073102_9.DAT
Array 10 Affymetrix SAMPLE 10 (OG 6 h) seedlings treated with oligogalacturonides for 6 hours Arabidopsis thaliana alpha-1,4-oligogalacturonic acid with degree of polymerization 9-18, from citrus pectin OG 6

SF_OGs_073102_10.EXP

SF_OGs_073102_10.DAT

SF_OGs_073102_10.CEL
Array 10d Affymetrix SAMPLE 10 (OG 6 h) seedlings treated with oligogalacturonides for 6 hours Arabidopsis thaliana alpha-1,4-oligogalacturonic acid with degree of polymerization 9-18, from citrus pectin OG 6

SF_OGs_073102_10d.DAT

SF_OGs_073102_10d.EXP

SF_OGs_073102_10d.CEL
Array 11 Affymetrix SAMPLE 11 (OG 6 h) seedlings treated with oligogalacturonides for 6 hours Arabidopsis thaliana alpha-1,4-oligogalacturonic acid with degree of polymerization 9-18, from citrus pectin OG 6

SF_OGs_073102_11.CEL

SF_OGs_073102_11.EXP

SF_OGs_073102_11.DAT
Array 12 Affymetrix SAMPLE 12 (OG 6 h) seedlings treated with oligogalacturonides for 6 hours Arabidopsis thaliana alpha-1,4-oligogalacturonic acid with degree of polymerization 9-18, from citrus pectin OG 6

SF_OGs_073102_12.CEL

SF_OGs_073102_12.EXP

SF_OGs_073102_12.DAT

Description     Treatment List     Sample List     Array List (Raw Data)    File List (Normalized Data And Other Information)
©2002 MASSACHUSETTS GENERAL HOSPITAL Version 00.02.00 About Us Contact Us