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Experiment Name:

Response to Erysiphe orontii infection, time course experiment

Experiment Description:

4-week old Col wild-type plants were infected with conidia from 10-day old E. orontii cultures. Leaves were harvested at 6, 12, 18, 24, 48, 72, 96, and 120 hours post-inoculation. Inoculations were done at different times of day so that all harvesting could be done at the same time of day, in the middle of the 12-hour light cycle. To limit effects of age, only leaves number 7 to 10 were harvested. Replicates are derived from three independent biological experiments, with no overlap in growing periods.

Starting Date (mm/dd/yyyy):

10/26/2004

Researcher:

Julia Dewdney

Genomics/Proteomics Site:

Massachusetts General Hospital

Genomics/Proteomics Investigator:

Fred Ausubel

Experiment Type:

transcriptional profiling
Array Name Array Type Sample Used To Make This Extract Sample Description Source For This Sample (Target) Treatment Used To Make This Extract Treatment Category Treatment Time (Hours) Files Available For Download For This Array
jd at+eo col wt 06h uninfected Affymetrix uninfected, 6h, exp1 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 6

JD At+Eo Col wt 06h uninfected.DAT

jd at+eo col wt 06h uninfected.cel

JD At+Eo Col wt 06h uninfected.EXP
jd at+eo col wt 06h infected Affymetrix infected, 6h, exp1 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 6

jd at+eo col wt 06h infected.cel

JD At+Eo Col wt 06h infected.EXP

JD At+Eo Col wt 06h infected.DAT
jd at+eo col wt 12h uninfected Affymetrix uninfected, 12h, exp1 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 12

JD At+Eo Col wt 12h uninfected.EXP

jd at+eo col wt 12h uninfected.cel

JD At+Eo Col wt 12h uninfected.DAT
jd at+eo col wt 12h infected Affymetrix infected, 12h, exp1 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 12

JD At+Eo Col wt 12h infected.EXP

jd at+eo col wt 12h infected.cel

JD At+Eo Col wt 12h infected.DAT
jd at+eo col wt 18h uninfected Affymetrix uninfected, 18h, exp1 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 18

JD At+Eo Col wt 18h uninfected.EXP

JD At+Eo Col wt 18h uninfected.DAT

jd at+eo col wt 18h uninfected.cel
jd at+eo col wt 18h infected Affymetrix infected, 18h, exp1 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 18

JD At+Eo Col wt 18h infected.EXP

JD At+Eo Col wt 18h infected.DAT

jd at+eo col wt 18h infected.cel
jd at+eo col wt 24h uninfected Affymetrix uninfected, 24h, exp1 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 24

jd at+eo col wt 24h uninfected.cel

JD At+Eo Col wt 24h uninfected.DAT

JD At+Eo Col wt 24h uninfected.EXP
jd at+eo col wt 24h infected Affymetrix infected, 24h, exp1 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 24

JD At+Eo Col wt 24h infected.DAT

jd at+eo col wt 24h infected.cel

JD At+Eo Col wt 24h infected.EXP
jd at+eo col wt 02d infected Affymetrix infected, 2d, exp1 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 48

JD At+Eo Col wt 02d infected.EXP

jd at+eo col wt 02d infected.cel

JD At+Eo Col wt 02d infected.DAT
jd at+eo col wt 02d uninfected Affymetrix uninfected, 2d, exp1 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 48

JD At+Eo Col wt 02d uninfected.EXP

jd at+eo col wt 02d uninfected.cel

JD At+Eo Col wt 02d uninfected.DAT
jd at+eo col wt 03d uninfected Affymetrix uninfected, 3d, exp1 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 72

JD At+Eo Col wt 03d uninfected.DAT

JD At+Eo Col wt 03d uninfected.EXP

jd at+eo col wt 03d uninfected.cel
jd at+eo col wt 03d infected Affymetrix infected, 3d, exp1 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 72

JD At+Eo Col wt 03d infected.EXP

jd at+eo col wt 03d infected.cel

JD At+Eo Col wt 03d infected.DAT
jd at+eo col wt 04d uninfected Affymetrix uninfected, 4d, exp1 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 96

JD At+Eo Col wt 04d uninfected.DAT

JD At+Eo Col wt 04d uninfected.EXP

jd at+eo col wt 04d uninfected.cel
jd at+eo col wt 04d infected Affymetrix infected, 4d, exp1 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 96

JD At+Eo Col wt 04d infected.DAT

jd at+eo col wt 04d infected.cel

JD At+Eo Col wt 04d infected.EXP
jd at+eo col wt 05d uninfected Affymetrix uninfected, 5d, exp1 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 120

jd at+eo col wt 05d uninfected.cel

JD At+Eo Col wt 05d uninfected.DAT

JD At+Eo Col wt 05d uninfected.EXP
jd at+eo col wt 05d infected Affymetrix infected, 5d, exp1 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 120

JD At+Eo Col wt 05d infected.EXP

jd at+eo col wt 05d infected.cel

JD At+Eo Col wt 05d infected.DAT
JD At+Eo Col wt exp2 06h uninfected Affymetrix uninfected, 6h, exp2 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 6

JD At+Eo Col wt exp2 06h uninfected.EXP

JD At+Eo Col wt exp2 06h uninfected.DAT

JD At+Eo Col wt exp2 06h uninfected.CEL
JD At+Eo Col wt exp2 06h infected Affymetrix infected, 6h, exp2 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 6

JD At+Eo Col wt exp2 06h infected.DAT

JD At+Eo Col wt exp2 06h infected.CEL

JD At+Eo Col wt exp2 06h infected.EXP
JD At+Eo Col wt exp2 12h uninfected Affymetrix uninfected, 12h, exp2 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 12

JD At+Eo Col wt exp2 12h uninfected.EXP

JD At+Eo Col wt exp2 12h uninfected.DAT

JD At+Eo Col wt exp2 12h uninfected.CEL
JD At+Eo Col wt exp2 12h infected Affymetrix infected, 12h, exp2 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 12

JD At+Eo Col wt exp2 12h infected.EXP

JD At+Eo Col wt exp2 12h infected.CEL

JD At+Eo Col wt exp2 12h infected.DAT
JD At+Eo Col wt exp2 18h uninfected Affymetrix uninfected, 18h, exp2 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 18

JD At+Eo Col wt exp2 18h uninfected.EXP

JD At+Eo Col wt exp2 18h uninfected.CEL

JD At+Eo Col wt exp2 18h uninfected.DAT
JD At+Eo Col wt exp2 18h infected Affymetrix infected, 18h, exp2 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 18

JD At+Eo Col wt exp2 18h infected.CEL

JD At+Eo Col wt exp2 18h infected.DAT

JD At+Eo Col wt exp2 18h infected.EXP
JD At+Eo Col wt exp2 24h uninfected Affymetrix uninfected, 24h, exp2 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 24

JD At+Eo Col wt exp2 24h uninfected.EXP

JD At+Eo Col wt exp2 24h uninfected.DAT

JD At+Eo Col wt exp2 24h uninfected.CEL
JD At+Eo Col wt exp2 24h infected Affymetrix infected, 24h, exp2 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 24

JD At+Eo Col wt exp2 24h infected.DAT

JD At+Eo Col wt exp2 24h infected.EXP

JD At+Eo Col wt exp2 24h infected.CEL
JD At+Eo Col wt exp2 02d uninfected Affymetrix uninfected, 2d, exp2 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 48

JD At+Eo Col wt exp2 02d uninfected.EXP

JD At+Eo Col wt exp2 02d uninfected.CEL

JD At+Eo Col wt exp2 02d uninfected.DAT
JD At+Eo Col wt exp2 02d infected Affymetrix infected, 2d, exp2 Arabidopsis thaliana infected E. orontii 48

JD At+Eo Col wt exp2 02d infected.DAT

JD At+Eo Col wt exp2 02d infected.EXP

JD At+Eo Col wt exp2 02d infected.CEL
JD At+Eo Col wt exp2 03d uninfected Affymetrix uninfected, 3d, exp2 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 72

JD At+Eo Col wt exp2 03d uninfected.DAT

JD At+Eo Col wt exp2 03d uninfected.CEL

JD At+Eo Col wt exp2 03d uninfected.EXP
JD At+Eo Col wt exp2 03d infected Affymetrix infected, 3d, exp2 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 72

JD At+Eo Col wt exp2 03d infected.DAT

JD At+Eo Col wt exp2 03d infected.EXP

JD At+Eo Col wt exp2 03d infected.CEL
JD At+Eo Col wt exp2 04d uninfected Affymetrix uninfected, 4d, exp2 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 96

JD At+Eo Col wt exp2 04d uninfected.CEL

JD At+Eo Col wt exp2 04d uninfected.DAT

JD At+Eo Col wt exp2 04d uninfected.EXP
JD At+Eo Col wt exp2 04d infected Affymetrix infected, 4d, exp2 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 96

JD At+Eo Col wt exp2 04d infected.CEL

JD At+Eo Col wt exp2 04d infected.DAT

JD At+Eo Col wt exp2 04d infected.EXP
JD At+Eo Col wt exp2 05d uninfected Affymetrix uninfected, 5d, exp2 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 120

JD At+Eo Col wt exp2 05d uninfected.EXP

JD At+Eo Col wt exp2 05d uninfected.DAT

JD At+Eo Col wt exp2 05d uninfected.CEL
JD At+Eo Col wt exp2 05d infected Affymetrix infected, 5d, exp2 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 120

JD At+Eo Col wt exp2 05d infected.CEL

JD At+Eo Col wt exp2 05d infected.EXP

JD At+Eo Col wt exp2 05d infected.DAT
JD At+Eo time exp3 uninf 6h Affymetrix uninfected, 6h, exp3 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 6

JD At+Eo time exp3 uninf 6h.EXP

JD At+Eo time exp3 uninf 6h.CEL

JD At+Eo time exp3 uninf 6h.DAT
JD At+Eo time exp3 Eo inf 6h Affymetrix infected, 6h, exp3 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 6

JD At+Eo time exp3 Eo inf 6h.EXP

JD At+Eo time exp3 Eo inf 6h.CEL

JD At+Eo time exp3 Eo inf 6h.DAT
JD At+Eo time exp3 uninf 12h Affymetrix uninfected, 12h, exp3 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 12

JD At+Eo time exp3 uninf 12h.EXP

JD At+Eo time exp3 uninf 12h.CEL

JD At+Eo time exp3 uninf 12h.DAT
JD At+Eo time exp3 Eo inf 12h Affymetrix infected, 12h, exp3 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 12

JD At+Eo time exp3 Eo inf 12h.CEL

JD At+Eo time exp3 Eo inf 12h.DAT

JD At+Eo time exp3 Eo inf 12h.EXP
JD At+Eo time exp3 uninf 18h Affymetrix uninfected, 18h, exp3 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 18

JD At+Eo time exp3 uninf 18h.DAT

JD At+Eo time exp3 uninf 18h.EXP

JD At+Eo time exp3 uninf 18h.CEL
JD At+Eo time exp3 Eo inf 18h Affymetrix infected, 18h, exp3 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 18

JD At+Eo time exp3 Eo inf 18h.DAT

JD At+Eo time exp3 Eo inf 18h.CEL

JD At+Eo time exp3 Eo inf 18h.EXP
JD At+Eo time exp3 uninf 24h Affymetrix uninfected, 24h, exp3 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 24

JD At+Eo time exp3 uninf 24h.DAT

JD At+Eo time exp3 uninf 24h.EXP

JD At+Eo time exp3 uninf 24h.CEL
JD At+Eo time exp3 Eo inf 24h Affymetrix infected, 24h, exp3 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 24

JD At+Eo time exp3 Eo inf 24h.EXP

JD At+Eo time exp3 Eo inf 24h.CEL

JD At+Eo time exp3 Eo inf 24h.DAT
JD At+Eo time exp3 uninf 2d Affymetrix uninfected, 2d, exp3 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 48

JD At+Eo time exp3 uninf 2d.EXP

JD At+Eo time exp3 uninf 2d.CEL

JD At+Eo time exp3 uninf 2d.DAT
JD At+Eo time exp3 Eo inf 2d Affymetrix infected, 2d, exp3 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 48

JD At+Eo time exp3 Eo inf 2d.CEL

JD At+Eo time exp3 Eo inf 2d.DAT

JD At+Eo time exp3 Eo inf 2d.EXP
JD At+Eo time exp3 uninf 3d Affymetrix uninfected, 3d, exp3 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 72

JD At+Eo time exp3 uninf 3d.DAT

JD At+Eo time exp3 uninf 3d.EXP

JD At+Eo time exp3 uninf 3d.CEL
JD At+Eo time exp3 Eo inf 3d Affymetrix infected, 3d, exp3 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 72

JD At+Eo time exp3 Eo inf 3d.EXP

JD At+Eo time exp3 Eo inf 3d.DAT

JD At+Eo time exp3 Eo inf 3d.CEL
JD At+Eo time exp3 uninf 4d Affymetrix uninfected, 4d, exp3 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 96

JD At+Eo time exp3 uninf 4d.EXP

JD At+Eo time exp3 uninf 4d.CEL

JD At+Eo time exp3 uninf 4d.DAT
JD At+Eo time exp3 Eo inf 4d Affymetrix infected, 4d, exp3 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 96

JD At+Eo time exp3 Eo inf 4d.CEL

JD At+Eo time exp3 Eo inf 4d.EXP

JD At+Eo time exp3 Eo inf 4d.DAT
JD At+Eo time exp3 uninf 5d Affymetrix uninfected, 5d, exp3 Arabidopsis thaliana, Col-0, rosette leaves uninfected uninfected 120

JD At+Eo time exp3 uninf 5d.CEL

JD At+Eo time exp3 uninf 5d.DAT

JD At+Eo time exp3 uninf 5d.EXP
JD At+Eo time exp3 Eo inf 5d Affymetrix infected, 5d, exp3 Arabidopsis thaliana, Col-0, rosette leaves infected E. orontii 120

JD At+Eo time exp3 Eo inf 5d.CEL

JD At+Eo time exp3 Eo inf 5d.EXP

JD At+Eo time exp3 Eo inf 5d.DAT

Description     Treatment List     Sample List     Array List (Raw Data)    File List (Normalized Data And Other Information)
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