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|
|
Inducing Treatment (1,2)
|
|
Locus
|
Description
|
OGs
|
FLG22
|
Chito-oligomer
|
PMR5, PMR6
|
NPR1 targets
|
Induced by avr
|
Induced by vir
|
SVI-dependent (3)
|
|
At1g05710
|
ethylene-responsive protein
|
Yes
|
Yes
|
|
|
|
|
|
Yes
|
|
AT1G08320
|
bZIP family transcription factor, contains Pfam profile: PF00170 bZIP transcription factor
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT1G10585
|
Expressed protein
|
Yes
|
Yes
|
|
|
|
Yes
|
|
|
|
AT1G13300
|
myb family transcription factor, contains Pfam domain, PF00249: Myb-like DNA-binding domain
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT1G18570
|
myb family transcription factor (MYB51), contains PFAM profile: PF00249
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT1G22810
|
encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT1G25560
|
AP2 domain-containing transcription factor, putative, similar to DNA-binding protein RAV2 GI:3868859 from (Arabidopsis thaliana)
|
|
|
|
Yes
|
|
|
|
|
|
AT1G28370
|
ERF11 (ethylene response factor 11)
|
Yes
|
Yes
|
|
|
|
|
Yes
|
|
|
AT1G30810
|
transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein, contains similarity to Swiss-Prot:P29375 retinoblastoma-binding protein 2 (RBBP-2) (Homo sapiens); contains Pfam domains PF02375: jmjN domain and PF02373: jmjC domain; intron between exons 6 and 7 was required to circumvent a frameshift. There could be an underlying sequence error.
|
|
|
Yes
|
|
|
|
|
|
|
AT1G42990
|
bZIP transcription factor family protein, contains Pfam profile: PF00170: bZIP transcription factor
|
Yes
|
Yes
|
|
Yes
|
|
|
|
|
|
AT1G43160
|
ERF (ethylene response factor), RAP2.6
|
|
Yes
|
|
|
|
Yes
|
Yes
|
|
|
AT1G50640
|
encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT1G51700
|
Dof-type zinc finger domain-containing protein (ADOF1), identical to cDNA adof1 mRNA for dof zinc finger protein, GI:3608260; contains Pfam profile PF02701: Dof domain, zinc finger
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT1G52890
|
NAM family protein.
|
|
Yes
|
|
|
|
Yes
|
Yes
|
|
|
AT1G57560
|
MYB50
|
|
|
|
|
|
Yes
|
Yes
|
|
|
AT1G62300
|
WRKY family transcription factor, similar to putative DNA-binding protein GI:7268215 from (Arabidopsis thaliana)
|
Yes
|
Yes
|
|
|
|
|
|
|
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AT1G64380
|
encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.
|
|
Yes
|
|
|
|
|
|
|
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AT1G66090
|
disease resistance protein (TIR-NBS class), putative, domain signature TIR-NBS exists, suggestive of a disease resistance protein.
|
Yes
|
Yes
|
|
|
|
Yes
|
Yes
|
|
|
AT1G67970
|
heat shock factor protein, putative (HSF5) / heat shock transcription factor, putative (HSTF5), identical to heat shock transcription factor 5 (HSF5) SP:Q9S7U5 from (Arabidopsis thaliana); contains Pfam profile: PF00447 HSF-type DNA-binding domain
|
|
Yes
|
Yes
|
|
|
|
|
|
|
AT1G73830
|
basic helix-loop-helix (bHLH) family protein, contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain
|
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repressed
|
Yes (4)
|
|
|
|
|
|
|
At1g77640
|
AP2/EREBP transcription factor
|
|
|
|
|
|
|
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Yes
|
|
AT1G80590
|
WRKY66
|
|
|
|
|
Yes
|
|
|
|
|
AT1G80840
|
WRKY40
|
Yes
|
Yes
|
|
|
|
|
Yes
|
|
|
AT2G17040
|
NAM family protein
|
|
Yes
|
|
|
|
Yes
|
|
|
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AT2G21900
|
WRKY59
|
|
|
|
|
Yes
|
|
|
|
|
AT2G23320
|
WRKY family transcription factor, identical to WRKY DNA-binding protein 15 GI:13506742 from (Arabidopsis thaliana)
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT2G24570
|
WRKY family transcription factor, identical to WRKY transcription factor 17 GI:15991743 from (Arabidopsis thaliana)
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT2G26150
|
heat shock factor (AtHsfA2)
|
Yes
|
Yes
|
|
|
|
|
Yes
|
|
|
AT2G28710
|
zinc finger (C2H2 type) family protein, contains Pfam domain, PF00096: Zinc finger, C2H2 type
|
|
Yes
|
|
|
|
|
|
|
|
AT2G30250
|
WRKY25
|
Yes
|
Yes
|
|
|
|
|
Yes
|
|
|
AT2G33710
|
encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT2G37430
|
zinc finger (C2H2 type) family protein (ZAT11), contains Pfam domain, PF00096: Zinc finger, C2H2 type
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT2G38470
|
WRKY33
|
Yes
|
Yes
|
|
|
|
Yes
|
Yes
|
|
|
AT2G40140
|
zinc finger (CCCH-type) family protein
|
Yes
|
Yes
|
|
|
|
Yes
|
Yes
|
|
|
AT2G40740
|
WRKY family transcription factor, contains Pfam profile: PF03106 WRKY DNA -binding domain; member of WRKY Transcription Factor; Group III
|
|
|
Yes
|
|
|
|
|
|
|
AT2G40750
|
WRKY54
|
|
|
|
|
Yes
|
Yes
|
Yes
|
|
|
AT2G44840
|
ERF13 (ethylene response factor 13)
|
|
|
|
|
Yes
|
|
Yes
|
|
|
AT2G46400
|
WRKY46
|
Yes
|
Yes
|
|
|
|
Yes
|
Yes
|
|
|
AT3G01080
|
WRKY58
|
|
|
|
|
Yes
|
|
|
|
|
AT3G04070
|
no apical meristem (NAM) family protein, contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAM GB:CAA63101 (Petunia x hybrida)
|
Yes
|
Yes
|
repressed
|
|
|
Yes
|
|
|
|
AT3G11020
|
DREB2B
|
|
|
|
|
Yes
|
|
|
|
|
AT3G11280
|
Myb family transcription factor, contains Pfam profile: PF00249 Myb-like DNA-binding domain
|
|
|
|
|
Yes
|
|
|
|
|
AT3G12910
|
putative NAC domain protein
|
Yes
|
Yes
|
|
|
Yes
|
|
|
|
|
AT3G14470
|
disease resistance protein (NBS-LRR class), putative, domain signature NBS-LRR exists, suggestive of a disease resistance protein.
|
|
|
Yes
|
|
|
|
|
|
|
AT3G15210
|
ethylene-responsive element-binding factor 4 (ERF4), identical to ethylene responsive element binding factor 4 SP:O80340 from (Arabidopsis thaliana); AP2 domain containing protein RAP2.5 mRNA, complete cds
|
Yes
|
Yes
|
Yes
|
|
|
|
|
|
|
AT3G15540
|
auxin-responsive protein / indoleacetic acid-induced protein 19 (IAA19), identical to SP|O24409 Auxin-responsive protein IAA19 (Indoleacetic acid-induced protein 19) {Arabidopsis thaliana}
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT3G19580
|
zinc finger (C2H2 type) protein 2 (AZF2), identical to Cys2/His2-type zinc finger protein 2 (Arabidopsis thaliana) gi|6009885|dbj|BAA85107; mRNA levels are upregulated in response to ABA, high salt, and mild dessication.
|
|
Yes
|
Yes
|
|
|
|
|
|
|
AT3G20810
|
transcription factor jumonji (jmjC) domain-containing protein, contains Pfam domain PF02373: jmjC domain
|
|
repressed
|
|
Yes
|
|
|
|
|
|
AT3G23230
|
ethylene-responsive factor, putative, similar to EREBP-4 GB:BAA07323 from (Nicotiana tabacum)
|
Yes
|
Yes
|
Yes
|
|
|
|
|
|
|
AT3G23250
|
myb family transcription factor (MYB15), similar to myb-related transcription factor GB:CAA66952 from (Lycopersicon esculentum)
|
Yes
|
Yes
|
Yes
|
|
|
Yes
|
Yes
|
|
|
AT3G25730
|
AP2 transcription factor, putative.
|
Yes
|
Yes
|
|
|
Yes
|
|
|
|
|
AT3G46600
|
scarecrow transcription factor family protein, scarecrow-like 11 - Arabidopsis thaliana, EMBL:AF036307
|
|
Yes
|
Yes
|
|
|
|
|
|
|
AT3G49210
|
expressed protein
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT3G50060
|
myb family transcription factor, contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA MYB-related protein (1107 bp) GI:1263096
|
|
|
Yes
|
|
|
|
|
|
|
AT3G50260
|
encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.
|
Yes
|
Yes
|
Yes
|
|
|
|
|
|
|
AT3G53600
|
zinc finger (C2H2 type) family protein, contains Pfam domain, PF00096: Zinc finger, C2H2 type
|
|
Yes
|
Yes
|
|
|
|
|
|
|
AT3G56400
|
WRKY 70 family transcription factor, DNA-binding protein 4 WRKY4 - Nicotiana tabacum, EMBL:AF193771; member of WRKY Transcription Factor; Group III
|
|
|
Yes
|
|
Yes
|
Yes
|
Yes
|
|
|
AT3G58120
|
bZIP transcription factor family protein, contains Pfam profile: PF00170 bZIP transcription factor ;supported by cDNA gi|15100054|gb|AF401300.1|AF401300
|
repressed
|
repressed
|
Yes (4)
|
repressed
|
|
Yes
|
Yes
|
|
|
AT4G01250
|
WRKY family transcription factor, contains Pfam profile: PF03106 WRKY DNA -binding domain
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT4G01460
|
bHLH family protein (BHLH057)
|
repressed
|
repressed
|
|
|
|
Yes
|
Yes
|
|
|
AT4G01960
|
expressed protein
|
|
Yes
|
|
|
|
|
|
|
|
AT4G09460
|
myb family transcription factor
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT4G11170
|
disease resistance protein (TIR-NBS-LRR class), putative, domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein.
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT4G11660
|
heat shock factor protein 7 (HSF7) / heat shock transcription factor 7 (HSTF7), identical to heat shock factor protein 7 (HSF7) SP:Q9T0D3 from (Arabidopsis thaliana)
|
|
|
Yes
|
|
|
|
|
|
|
AT4G17230
|
scarecrow-like transcription factor 13 (SCL13)
|
Yes
|
Yes
|
Yes
|
|
|
|
Yes
|
|
|
AT4G17490
|
ethylene-responsive element-binding protein, putative, similar to SP|O80341 Ethylene responsive element binding factor 5 (AtERF5) {Arabidopsis thaliana}, AtERF6 mRNA for ethylene responsive element binding factor, ERF-6 mRNA for extracellular signal-regulated factor,
|
Yes
|
Yes
|
|
Yes
|
|
|
|
|
|
AT4G17500
|
ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein, identical to SP|O80337 Ethylene responsive element binding factor 1 (EREBP-2 protein) (Arabidopsis thaliana); a false single bp exon was added to circumvent a single basepair insertion in the genomic sequence, supported by cDNA/genome alignment.; AtERF-1 mRNA for ethylene responsive element binding factor
|
Yes
|
Yes
|
Yes
|
|
|
|
|
|
|
AT4G18170
|
WRKY family transcription factor, similar to DNA-binding protein 2 GI:4322940 from (Nicotiana tabacum); contains Pfam profile: PF03106 WRKY DNA -binding domain; member of WRKY Transcription Factor; Group II-c
|
Yes
|
Yes
|
Yes
|
|
|
|
|
|
|
AT4G18880
|
At-HsfA4A, heat shock transcription factor 21 (HSF21), identical to heat shock transcription factor 21 (Arabidopsis thaliana) GI:3399765; contains Pfam profile: PF00447 HSF-type DNA-binding domain
|
Yes
|
Yes
|
Yes
|
|
|
|
Yes
|
|
|
AT4G23810
|
WRKY53
|
Yes
|
Yes
|
|
|
Yes
|
Yes
|
Yes
|
|
|
AT4G27410
|
NAM family protein (RD26)
|
|
|
|
|
|
Yes
|
Yes
|
|
|
AT4G31680
|
putative auxin response factor 24
|
|
|
|
|
|
|
Yes
|
|
|
AT4G31800
|
WRKY 18 family transcription factor; AF224698 Arabidopsis thaliana WRKY DNA-binding protein 18 (WRKY18) mRNA, complete cds
|
Yes
|
Yes
|
Yes
|
|
Yes
|
Yes
|
Yes
|
|
|
AT4G36540
|
bHLH family protein (BHLH058)
|
repressed
|
repressed
|
|
|
|
Yes
|
Yes
|
|
|
AT4G36990
|
heat shock factor protein 4
|
Yes
|
Yes
|
|
|
|
Yes
|
Yes
|
|
|
AT4G37780
|
myb family transcription factor (MYB87), identical to AtMYB87 R2R3-MYB transcription factor GI:2832559 from (Arabidopsis thaliana); contains Pfam profile: PF00249 myb-like DNA-binding domain
|
|
Yes
|
|
|
|
|
|
|
|
AT5G04340
|
zinc finger (C2H2 type) family protein, contains Pfam domain, PF00096: Zinc finger, C2H2 type
|
Yes
|
Yes
|
Yes
|
|
|
|
|
|
|
AT5G05090
|
Myb family transcription factor, contains Pfam profile: PF00249 myb-like DNA-binding domain
|
|
|
|
|
Yes
|
|
|
|
|
AT5G13080
|
WRKY 75 family transcription factor, WRKY DNA binding protein - Solanum tuberosum, EMBL:AJ278507; member of WRKY Transcription Factor; Group II-c
|
Yes
|
Yes
|
Yes
|
Yes
|
|
Yes
|
|
|
|
AT5G15210
|
zinc finger homeobox family protein / ZF-HD homeobox family protein, various predicted proteins, Arabidopsis thaliana
|
|
Yes
|
|
|
|
|
|
|
|
AT5G22290
|
no apical meristem (NAM) family protein, contains Pfam PF02365: No apical meristem (NAM) domain
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT5G22380
|
NAM family protein
|
|
Yes
|
|
|
|
Yes
|
|
|
|
AT5G22570
|
WRKY38
|
|
|
|
|
Yes
|
Yes
|
|
|
|
AT5G24110
|
member of WRKY Transcription Factor; Group III
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT5G24590
|
turnip crinkle virus-interacting protein / TCV-interacting protein (TIP), contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAC2 (GI:6456751) {Arabidopsis thaliana}; identical to cDNA TIP mRNA, GI:9408600
|
Yes
|
Yes
|
Yes
|
|
|
|
|
|
|
AT5G43170
|
zinc finger (C2H2 type) protein 3 (AZF3), identical to Cys2/His2-type zinc finger protein 3 (Arabidopsis thaliana) gi|6009889|dbj|BAA85109; mRNA levels are elevated in response to high salinity and low temperature.
|
Yes
|
Yes
|
Yes
|
|
|
|
|
|
|
AT5G45710
|
heat shock transcription factor family protein, contains Pfam profile: PF00447 HSF-type DNA-binding domain
|
|
Yes
|
|
|
|
|
|
|
|
AT5G46910
|
transcription factor jumonji (jmj) family protein, contains Pfam domains PF02375: jmjN domain and PF02373: jmjC domain
|
Yes
|
Yes
|
Yes
|
|
|
|
|
|
|
AT5G47220
|
ethylene-responsive element-binding factor 2 (ERF2), identical to SP|O80338 Ethylene responsive element binding factor 2 (AtERF2) (Arabidopsis thaliana); ERF transcription factor containing. Function as activator of GCC boxûdependent transcription.
|
|
|
Yes
|
Yes
|
|
|
|
|
|
AT5G47370
|
homeobox-leucine zipper protein 2 (HAT2) / HD-ZIP protein 2, identical to homeobox-leucine zipper protein HAT2 (HD-ZIP protein 2) (Arabidopsis thaliana) SP:P46601; contains Pfam profiles PF04618: HD-ZIP protein N terminus, PF02183: Homeobox associated leucine zipper, PF00046: Homeobox domain
|
Yes
|
|
|
|
|
|
|
|
|
AT5G48150
|
phytochrome A signal transduction 1 (PAT1)
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT5G49520
|
member of WRKY Transcription Factor; Group II-c
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT5G51190
|
encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.
|
Yes
|
Yes
|
|
|
|
|
|
|
|
AT5G59450
|
scarecrow-like transcription factor 11 (SCL11), scarecrow-like 11, Arabidopsis thaliana, EMBL:AF036307
|
Yes
|
Yes
|
Yes
|
|
|
|
|
|
|
AT5G59820
|
zinc finger (C2H2 type) family protein (ZAT12), identical to zinc finger protein ZAT12 (Arabidopsis thaliana) gi|1418325|emb|CAA67232
|
Yes
|
Yes
|
Yes
|
|
|
|
|
|
|
AT5G62020
|
heat shock factor protein, putative (HSF6) / heat shock transcription factor, putative (HTSF6), identical to heat shock transcription factor 6 (HSF6) SP: Q9SCW4 from (Arabidopsis thaliana) ;contains Pfam profile: PF00447 HSF-type DNA-binding domain
|
Yes
|
Yes
|
Yes
|
|
|
|
|
|
|
AT5G62470
|
myb family transcription factor (MYB96), contains Pfam profile: PF00249 myb-like DNA-binding domain
|
Yes
|
Yes
|
Yes
|
|
|
|
|
|
